Species (13.556)
- Diaporthe caraganae Jacz. 1895
- Diaporthe fasciculata Nitschke 1867
- Diaporthe forabilis Nitschke 1870
- Diaporthe geographica Fuckel 1872
- Diaporthe helicis Niessl 1876
- Diaporthe fallaciosa Nitschke 1870
- Diaporthe importata Nitschke 1870
- Diaporthe parabolica Fuckel 1870
- Diaporthe putator Nitschke 1870
- Diaporthe pustulata (Desm.) Sacc. 1882
- Diaporthe radula Nitschke 1870
- Diaporthe rehmiana Starbäck 1890
- Diaporthe retecta Fuckel & Nitschke 1870
- Diaporthe revellens Nitschke 1870
- Diaporthe sorbicola (Nitschke) Bref. & Tavel 1891
- Diaporthe simulans Sacc. 1875
- Diaporthe sordida Nitschke 1870
- Diaporthe spiculosa (Alb. & Schwein.) Nitschke 1870
- Diaporthe sponheimeri Kirschst. 1936
- Diaporthe strumella (Fr.) Fuckel 1870
- Diaporthe tessella (Pers.) Rehm 1873
- Diaporthe syngenesia (Fr. : Fr.) Fuckel 1870
- Diaporthe valerianae Fuckel 1882
- Diaporthe tulasnei Niessl 1870
- Diaporthe valida Nitschke 1870
- Diaporthe valsiformis (Rehm) Petr. 1921
- Diaporthella aristata (Fr.) Petr. 1924
- Diatrype hypoxyloides De Not. 1863
- Diatrype laurina Rehm 1879
- Diatrype melaleuca (Kunze) Cooke 1885
- Diatrype implicata (Lév.) Rappaz 1987
- Diatrype polycocca Fuckel 1870
- Diatrype petrakii Rappaz 1987
- Diatrype rappazii (Chleb.) Lar.N. Vassiljeva 2004
- Diatrype subaffixa (Schwein.) Cooke 1883
- Diatrype spilomea Syd. 1934
- Diatrype undulata (Pers. : Fr.) Fr. 1849
- Diatrypella angulata Ces. & De Not.
- Diatrypella decorata Nitschke 1867
- Diatrypella exigua G. Winter 1874
- Diatrypella nigroannulata (Grev.) Nitschke 1867
- Diatrypella minuta Nitschke 1867
- Diatrypella placenta Rehm 1882
- Dibeloniella raineri (De Not.) Nannf. 1932
- Dichomera laburni Cooke & Massee 1890
- Dichomera saubinetii (Mont.) Cooke 1878
- Dendroclathra lignicola (Abdullah, Gené & Guarro) Voglmayr 2011
- Dematioscypha richonis var. olivacea (Velen.) Huhtinen 1987
- Dendrodochium citrinum Grove 1886
- Dendrotrichoscypha cretacea (Velen.) Svr?ek 1985
- Dendrotrichoscypha epilobii (Velen.) Svr?ek 1985
- Dendryphion europaeum Crous & R.K. Schumacher 2014
- Dennisiella babingtonii (Berk.) Bat. & Cif. 1962
- Dennisiodiscus hippocastani (Richon) Matheis 1977
- Dennisiodiscus prasinus (Quél.) Svr?ek 1976
- Dermatea alba Velen. 1947
- Diaporthe circumscripta G.H. Otth 1870
- Diaporthe corni Fuckel 1870
- Diaporthe impulsa (Cooke & Peck) Sacc. 1882
- Encoelia haematochlora var. microspora (Speg.) Svr?ek 1974
- Encoelia heteromera (Mont.) Nannf. 1939
- Encoelia mollisioides Spooner 1988
- Encoelia petrakii Gremmen 1957
- Encoelia pruinosa (Ellis & Everh.) Tork. & Eckblad 1977
- Encoelia kirschsteiniana (Jaap) Kirschst. 1938
- Encoelia salicella (Höhn.) Petr. 1925
- Encoelia rhenana (Kirschst.) Baral & G. Marson 1997
- Encoeliopsis rhododendri (Ces. ex Rabenh.) Nannf. 1932
- Encoelia ulmi (Tul. & C. Tul.) Boud. 1907
- Endococcus fusiger Th. Fr. & Almqu. 1867
- Endococcus karlstadtensis Kocourk. & Brackel 2006
- Endococcus perpusillus Nyl. 1857
- Endophragmia atra (Berk. & Broome) M.B. Ellis 1959
- Endophragmia stemphylioides (Corda) M.B. Ellis 1959
- Endophragmiella franconica Brackel & Markovskaja 2009
- Endophragmiella pallescens B. Sutton 1973
- Endoxyla mallochii Unter., A. Carter & Réblová 2013
- Enterocarpus grenotii Locq.-Lin. 1977
- Entodesmium multiseptatum (G. Winter) L. Holm 1957
- Entodesmium niesslianum (Rabenh.) L. Holm 1957
- Entoleuca mammata (Wahlenb.) J.D. Rogers & Y.M. Ju 1996
- Eurotium herbariorum (F.H. Wigg.) Link 1821
- Euryachora rhytismoides (J. Müll.) Ferd. & O. Rostr. 1928
- Eurotium insigne G. Winter 1874
- Eutypa astroidea (Fr. : Fr.) Rappaz 1987
- Eutypa aspera (Nitschke) Fuckel 1870
- Euryachora sedi (Fr. : Fr.) Fuckel 1870
- Eutryblidiella viburni (Schwein.) J.W. Groves 1969
- Eutypa laevata (Nitschke) Sacc. 1875
- Eutypa crustata (Fr. : Fr.) Sacc. 1875
- Eutypa maura (Fr. : Fr.) Fuckel 1864
- Eutypa petrakii Rappaz 1987
- Eutypa petrakii var. hederae Rappaz 1987
- Eutypa polycocca (Fr. : Fr.) P. Karst. 1873
- Eutypa quercicola Rappaz 1987
- Eutypa sparsa Romell 1892