Species (65)
- Nassula muscicola ssp. muscicola
- Euplotes muscicola Kahl 1932 ssp. muscicola
- Chromocyphella muscicola (Fr.) Donk 1959
- Arrhenia muscicola (Fr.) Quél. 1888
- Muscicola dubia (Velen.) Svr?ek 1985
- Euplotes alatus ssp. muscicola
- Strigula muscicola
- Polychidium muscicola (Sw.) Gray
- Nassula muscicola ssp. fluviatilis
- Lionotus muscicola Kahl 1931
- Euplotes muscicola ssp. alata
- Spirotaenia muscicola
- Monacha muscicola
- Cyrtolophosis muscicola Stokes 1885
- Protocyclidium muscicola Kahl 1931
- Amphileptus muscicola
- Euplotes muscicola Kahl 1932 ssp. alata
- Kerona muscicola
- Euplotopsis muscicola ssp. alatus
- Euplotes muscicola
- Paraholosticha muscicola Kahl 1932
- Euplotopsis muscicola
- Euplotes muscicola Kahl 1932 ssp. bialatus
- Phialinides muscicola Kahl 1943
- Phialina muscicola Kahl 1943
- Balantidioides muscicola Penard 1922
- Balantidiopsis muscicola Penard 1922
- Cyclidium muscicola Kahl 1931
- Drepanomonas muscicola Foissner 1987
- Nassulopsis muscicola Kahl 1931
- Nassula muscicola Kahl 1931
- Paraholosticha muscicola Kahl 1932
- Hahnia muscicola Simon E.
- Archinassula muscicola Kahl 1935
- Euplotes muscicola Kahl 1932
- Holosticha muscicola Gellert 1956
- Hemiophrys muscicola Kahl 1931
- Keronopsis muscicola Kahl 1932
- Kreyella muscicola Kahl 1931
- Kuehneltiella muscicola Foissner 1993
- Protospathidium muscicola Dragesco & Dragesco-Kernéis 1979
- Rondacineta muscicola Penard ()
- Spathidium muscicola Kahl 1930
- Tokophrya muscicola Penard 1914
- Phialinides muscicola Kahl 1943
- Lacrymaria muscicola Kahl 1943
- Cephaliophora muscicola G.L. Barron, C. Morik. & Saikawa 1990
- Mycena muscicola Robich 2008
- Mitrula muscicola Henn. 1885
- Eocronartium muscicola (Pers. : Fr.) Fitzp. 1918
- Epibryon muscicola (Racov.) Döbbeler 1978
- Calonectria muscicola Zerova 1955
- Asterostroma muscicola (Berk. & M.A. Curtis) Massee 1889
- Peziza muscicola Donadini 1977
- Pezizella muscicola Graddon 1977
- Sistotrema muscicola (Pers.) S. Lundell 1947
- Corticium muscicola Bres. 1903
- Lasiosphaeria muscicola De Not. 1893
- Frullania cesatiana var. muscicola
- Helotium hylocomii Velen. 1934
- Poria albopallescens Bourdot & Galzin 1925
- Frullania azorica Sim-Sim & al.
- Rimbachia arachnoidea (Peck) Redhead 1984
- Sistotrema octosporum (J. Schröt. ex Höhn. & Litsch.) Hallenb. 1984